CMC Research Institutes

Western Canada Sedimentary Basin (WCSB) crude oil source rocks accumulated typically in “starved” depositional settings of Sloss outer detrital facies belts and lesser stratigraphic cycles. These produced petroleum from marine type II organic matter in response to burial by commonly westward-thickening overlying successions. Oil occurs commonly within the “Sloss” sequence containing its source rock, often up dip from the “petroleum kitchen.” Migration pathways cross stratal contacts, unconformities and structures, and much oil migrated into adjacent sequences, especially into Lower Cretaceous Mannville Group reservoirs. Anaerobic biodegradation affects oil quality and generates secondary biogenic gas. The WCSB oil system paradigm predates the recognition of anaerobic biodegradation. Biodegradation in post-Mannville reservoirs remains underappreciated. Natural gases originate by thermogenic and biogenic mechanisms from kerogens, coals, and crude oils. Gases are variably altered: physically, microbially, and inorganically. Few oil studies addressed solution and associated primary thermogenic or secondary biogenic gas. Gas studies are independent of oil studies and none recognize secondary biogenic gas even in association with biodegraded oils. We hypothesize that secondary biogenic gas occurs commonly, often mixed with other gas, to produce hydrocarbon isotope ratios and variations distinctive from primary biogenic and thermogenic gases. Where Mannville oil pools have sources in underlying marine rocks, Mannville gases are attributed largely to nonmarine sources. Currently, cross-stratal migration is inferred less commonly for gas than for oil. The inference of gas stratigraphic immobility is problematic for biodegradation studies that infer large secondary biogenic gas fluxes into soil and atmospheric sinks, the migration pathways of which pass through Cretaceous strata. In some unconventional plays, gas isotopic “rollover” and “reversal” due to thermal cracking has implications for reservoir performance. Efforts to understand Cordilleran petroleum systems merit investigation to extend unconventional resource plays westward from Interior Platform.

Dual-energy X-ray absorptiometric bone mineral density (DXA BMD) is a strong predictor of fracture risk in untreated patients. However, previous patient-level studies suggest that BMD changes explain little of the fracture risk reduction observed with osteoporosis treatment. We investigated the relevance of DXA BMD changes as a predictor for fracture risk reduction using data from the FREEDOM trial, which randomly assigned placebo or denosumab 60 mg every 6 months to 7808 women aged 60 to 90 years with a spine or total hip BMD T-score < −2.5 and not < −4.0. We took a standard approach to estimate the percent of treatment effect explained using percent changes in BMD at a single visit (months 12, 24, or 36). We also applied a novel approach using estimated percent changes in BMD from baseline at the time of fracture occurrence (time-dependent models). Denosumab significantly increased total hip BMD by 3.2%, 4.4%, and 5.0% at 12, 24, and 36 months, respectively. Denosumab decreased the risk of new vertebral fractures by 68% (p < 0.0001) and nonvertebral fracture by 20% (p = 0.01) over 36 months. Regardless of the method used, the change in total hip BMD explained a considerable proportion of the effect of denosumab in reducing new or worsening vertebral fracture risk (35% [95% confidence interval (CI): 20%–61%] and 51% [95% CI: 39%–66%] accounted for by percent change at month 36 and change in time-dependent BMD, respectively) and explained a considerable amount of the reduction in nonvertebral fracture risk (87% [95% CI: 35% – >100%] and 72% [95% CI: 24% – >100%], respectively). Previous patient-level studies may have underestimated the strength of the relationship between BMD change and the effect of treatment on fracture risk or this relationship may be unique to denosumab. © 2012 American Society for Bone and Mineral Research

Candidate osteoporosis gene variants were examined for associations with fracture risk and bone mineral density (BMD). A total of 9,704 white women were recruited at four U.S. clinical centers and enrolled into the Study of Osteoporotic Fractures, a longitudinal cohort study. Genotyping of 31 polymorphisms from 18 candidate osteoporosis genes was performed in 6,752 women. Incident radiographic fractures were identified at the third and eighth examinations compared with the baseline examination. BMD was measured at the total hip by dual-energy X-ray absorptiometry. Analyses were adjusted for age, clinic site, and self-reported ethnicity. During a mean follow-up of 14.5 years, a total of 849 hip, 658 vertebral, and 2,496 nonhip/nonvertebral fractures occurred in 6,752 women. Women carrying the ALOX15_G48924T T/T genotype had a higher rate of hip fracture (hazard ratio [HR] = 1.33;95% confidence interval [95% CI] = 1.00-1.77) compared with the G/G genotype. Compared with those carrying the PRL_T228C T/T genotype, women with either the C/C (HR = 0.80; 95% CI = 0.67-0.95) or C/T (HR = 0.81; 95% CI = 0.68-0.97) genotype had a lower rate of nonvertebral/nonhip fractures. Women carrying the BMP2_A125611G G/G genotype had a higher rate of vertebral fracture (odds ratio [OR] = 1.51; 95% CI = 1.03-2.23) compared with the A/A genotype. Women with the ESR1_C1335G G/G genotype had a higher rate of vertebral fracture (OR = 1.64; 95% CI = 1.07-2.50) compared with the C/C genotype. Compared with those with the MMP2_C595T C/C genotype, women with the C/T (OR = 0.79; 95% CI = 0.65-0.96) or T/T (OR = 0.44; 95% CI = 0.27-0.72) genotype had a lower rate of vertebral fracture. In conclusion, polymorphisms in several candidate genes were associated with hip, vertebral, and nonhip/nonvertebral fractures but not with total hip BMD in this large population based cohort study.