Continuous Plankton Recorder Survey

Abstract Of all the interconnected threats facing the planet, the top two are the climate and the biodiversity crises. Neither problem will be solved if we ignore the ocean. To turn the tide in favour of humanity and a habitable planet, we need to recognize and better value the fundamental role that the ocean plays in the earth system, and prioritize the urgent action needed to heal and protect the ocean at the ‘Earthscape’ level – the planetary scale at which processes to support life operate. The countries gathering at COP26 have unparalleled political capacity and leadership to make this happen. COP26 could be the turning point, but there must be commitment to united action for the ocean, as well as planning to meet those commitments, based on science‐led solutions that address the interconnectivity of the ocean, climate, and biodiversity. Key ways in which the ocean both contributes to and acts as the major buffer for climate change are summarized, focusing on temperature, but not forgetting the role of storing carbon. It is noted with ‘high confidence’ that the ocean has stored 91% of the excess heat from global warming, with land, melting ice, and the atmosphere only taking up approximately 5, 3, and 1%, respectively. We also highlight the impact of the recent large release of heat from the ocean to the atmosphere during the 2015–2016 El Niño. We then present six science‐based policy actions that form a recovery stimulus package for people, climate, nature, and the planet. Our proposals highlight what is needed to view, value, and treat the planet, including the ocean, for the benefit and future of all life.

Along the North Atlantic coasts of the United States, sea levels are rising at higher rates than the global average. Additionally, sea level rise (SLR) can cause reduction and redistribution of wetlands across the low-lying coastal landscape. This study applied a coupled storm surge and waves model to the Chesapeake Bay regions that are prone to SLR. Two historical storms of low and high wind intensity were simulated for current and potential future sea-level and land cover conditions. The future scenarios incorporated projections of local SLR and land use due to potential reduction and changes in coastal wetlands. Simulated flood depths were used in depth–damage functions to estimate prospective property damages, and were combined with population density information to estimate potential number of people at risk. The results showed that, depending on storm intensity, the total flooded area can increase from the baseline by 1.3–2.3 times in the minimum SLR scenario, and by 2.1–4.7 times in the maximum SLR scenario. The maximum SLR was estimated to cause approximately $5.8 billion to $8.6 billion in additional damages and potentially to affect 1–1.2 million people more than the number affected in current conditions. Results also suggest that the low-intensity storm was projected to have greater impacts in the future than the high-intensity storm today, indicating that even relatively weak storms may cause considerable damage to coastal communities in a future with SLR. Finally, flooding, property damage, and the number of people affected in the future scenarios were exacerbated by wetlands reduction and change—in other words, the protective services currently provided by natural lands in coastal areas can be diminished in the future with SLR.

© Crown Copyright 2018. This is a fully open access article distributed under an Open Government Licence (OGL) http://www.nationalarchives.gov.uk/doc/open-government-licence/version/3/ which is compatible with CC-BY (Creative Commons Attribution Licence). The attached file is the published pdf version.

Viruses play a crucial role in the marine environment, promoting nutrient recycling and biogeochemical cycling and driving evolutionary processes. Tiny marine phytoplankton called prasinophytes are ubiquitous and significant contributors to global primary production and biomass. A number of viruses (known as prasinoviruses) that infect these important primary producers have been isolated and characterised over the past decade. Here we review the current body of knowledge about prasinoviruses and their interactions with their algal hosts. Several genes, including those encoding for glycosyltransferases, methyltransferases and amino acid synthesis enzymes, which have never been identified in viruses of eukaryotes previously, have been detected in prasinovirus genomes. The host organisms are also intriguing; most recently, an immunity chromosome used by a prasinophyte in response to viral infection was discovered. In light of such recent, novel discoveries, we discuss why the cellular simplicity of prasinophytes makes for appealing model host organism–virus systems to facilitate focused and detailed investigations into the dynamics of marine viruses and their intimate associations with host species. We encourage the adoption of the prasinophyte Ostreococcus and its associated viruses as a model host–virus system for examination of cellular and molecular processes in the marine environment.

Abstract. Antarctic krill (Euphausia superba) and salps are major macroplankton contributors to Southern Ocean food webs and krill are also fished commercially. Managing this fishery sustainably, against a backdrop of rapid regional climate change, requires information on distribution and time trends. Many data on the abundance of both taxa have been obtained from net sampling surveys since 1926, but much of this is stored in national archives, sometimes only in notebooks. In order to make these important data accessible we have collated available abundance data (numerical density, no. m−2) of postlarval E. superba and salps (combined aggregate and solitary stages and species) into a central database, KRILLBASE, together with environmental information, standardisation and metadata. The aim is to provide a temporal-spatial data resource to support a variety of research such as biogeochemistry, autecology, higher predator foraging and food web modelling in addition to fisheries management and conservation. Previous versions of KRILLBASE have led to a series of papers since 2004 which illustrate some of the potential uses of this database. With increasing numbers of requests for these data we here provide an updated version of KRILLBASE that contains data from 15,194 net hauls, including 12,758 with krill abundance data and 9,726 with salp abundance data. These data were collected by 10 nations and span 56 seasons in two epochs (1926–1939 and 1976–2016). Here, we illustrate the seasonal, inter-annual, regional and depth coverage of sampling, and provide both circumpolar- and regional-scale distribution maps. Krill abundance data have been standardised to accommodate variation in sampling methods, and we have presented these as well as the raw data. Information is provided on how to screen, interpret and use KRILLBASE to reduce artefacts in interpretation, with contact points for the main data providers.

Copepods are an important link in marine food webs bridging primary and secondary production with higher trophic levels. Viral infections of phytoplankton can short circuit this traditional food web and release significant quantities of carbon from phytoplankton into the dissolved organic pool. The magnitude of the carbon released is in part dependent on the direct and indirect effects of viral infections on the grazing rates of copepods. During viral infection, phytoplankton undergo significant physiological and biochemical changes which could influence their susceptibility to herbivorous zooplankton. In this study, grazing experiments were conducted to investigate the impact of <it>Emiliania huxleyi</it> infection by the coccolithovirus EhV-86 on the ingestion rates of the calanoid copepod <it>Acartia tonsa</it>. Our results showed significantly lower ingestion of infected cells as compared to uninfected cells. High-resolution grazing experiments suggest that the lower ingestion rates are initiated within hours of infection. These results suggest that viral infections can alter food web structure and may result in lower food web efficiency. Hence, the overall impact of coccolithovirus infection on ecosystem function and carbon transfer during the progression of an <it>E. huxleyi</it> bloom should be considered in the context of copepod grazers.

Abstract The North Atlantic Ocean contains diverse patterns of seasonal phytoplankton blooms with distinct internal dynamics. We analyzed blooms using remotely-sensed chlorophyll a concentration data and change point statistics. The first bloom of the year began during spring at low latitudes and later in summer at higher latitudes. In regions where spring blooms occurred at high frequency (i.e., proportion of years that a bloom was detected), there was a negative correlation between bloom timing and duration, indicating that early blooms last longer. In much of the Northeast Atlantic, bloom development extended over multiple seasons resulting in peak chlorophyll concentrations in summer. Spring bloom start day was found to be positively correlated with a spring phenology index and showed both positive and negative correlations to sea surface temperature and the North Atlantic Oscillation in different regions. Based on the characteristics of spring and summer blooms, the North Atlantic can be classified into two regions: a seasonal bloom region, with a well-defined bloom limited to a single season; and a multi-seasonal bloom region, with blooms extending over multiple seasons. These regions differed in the correlation between bloom start and duration with only the seasonal bloom region showing a significant, negative correlation. We tested the hypothesis that the near-surface springtime distribution of copepods that undergo diapause (Calanus finmarchicus, C. helgolandicus, C. glacialis, and C. hyperboreus) may contribute to the contrast in bloom development between the two regions. Peak near-surface spring abundance of the late stages of these Calanoid copepods was generally associated with areas having a well-defined seasonal bloom, implying a link between bloom shape and their abundance. We suggest that either grazing is a factor in shaping the seasonal bloom or bloom shape determines whether a habitat is conducive to diapause, while recognizing that both factors can re-enforce each other.

Marine viruses are critical drivers of ocean biogeochemistry and their abundances vary spatiotem- porally in the global oceans, with upper estimates exceeding 10 8 per ml. Over many years, a con- sensus has emerged that virus abundances are typically 10-fold higher than prokaryote abundances. The use of a fixed-ratio suggests that the relationship between virus and prokaryote abundances is both predictable and linear. However, the true explanatory power of a linear relationship and its robustness across diverse ocean environments is unclear. Here, we compile 5671 prokaryote and virus abundance estimates from 25 distinct marine surveys to characterize the relationship between virus and prokaryote abundances. We find that the median virus-to-prokaryote ratio (VPR) is 10:1 and 16:1 in the near- and sub-surface oceans, respectively. Nonetheless, we observe substantial variation in the VPR and find either no or limited explanatory power using fixed-ratio models. Instead, virus abundances are better described as nonlinear, power-law functions of prokaryote abundances - par- ticularly when considering relationships within distinct marine surveys. Estimated power-laws have scaling exponents that are typically less than 1, signifying that the VPR decreases with prokaryote density, rather than remaining fixed. The emergence of power-law scaling presents a challenge for mechanistic models seeking to understand the ecological causes and consequences of marine virus- microbe interactions. Such power-law scaling also implies that efforts to average viral effects on microbial mortality and biogeochemical cycles using “representative” abundances or abundance- ratios need to be refined if they are to be utilized to make quantitative predictions at regional or global ocean scales.

Understanding marine regime shifts is important not only for ecology but also for developing marine management that assures the provision of ecosystem services to humanity. While regime shift theory is well developed, there is still no common understanding on drivers, mechanisms and characteristic of abrupt changes in real marine ecosystems. Based on contributions to the present theme issue, we highlight some general issues that need to be overcome for developing a more comprehensive understanding of marine ecosystem regime shifts. We find a great divide between benthic reef and pelagic ocean systems in how regime shift theory is linked to observed abrupt changes. Furthermore, we suggest that the long-lasting discussion on the prevalence of top-down trophic or bottom-up physical drivers in inducing regime shifts may be overcome by taking into consideration the synergistic interactions of multiple stressors, and the special characteristics of different ecosystem types. We present a framework for the holistic investigation of marine regime shifts that considers multiple exogenous drivers that interact with endogenous mechanisms to cause abrupt, catastrophic change. This framework takes into account the time-delayed synergies of these stressors, which erode the resilience of the ecosystem and eventually enable the crossing of ecological thresholds. Finally, considering that increased pressures in the marine environment are predicted by the current climate change assessments, in order to avoid major losses of ecosystem services, we suggest that marine management approaches should incorporate knowledge on environmental thresholds and develop tools that consider regime shift dynamics and characteristics. This grand challenge can only be achieved through a holistic view of marine ecosystem dynamics as evidenced by this theme issue.