Graph Operations, Graph Transformations and Monadic Second-Order Logic A survey

Graph Operations, Graph Transformations and Monadic Second-Order Logic:: A survey

Vigna and Ghezzi showed that the language of grid graphs could not be constructed by their context-free graph grammars [1]. In this paper, we construct a context-sensitive graph grammar for the two-dimensional grid graphs.

We consider monadic second order logic (MSO) and the modal μ-calculus (Lμ) over transition systems (Kripke structures). It is well known that every class of transition systems which is definable by a sentence of Lμ is definable by a sentence of MSO as well. It will be shown that the converse is also true for an important fragment of MSO: every class of transition systems which is MSO-definable and which is closed under bisimulation - i.e., the sentence does not distinguish between bisimilar models - is also Lμ-definable. Hence we obtain the following expressive completeness result: the bisimulation invariant fragment of MSO and Lμ are equivalent. The result was proved by David Janin and Igor Walukiewicz. Our presentation is based on their article [91]. The main step is the development of automata-based characterizations of Lμ over arbitrary transition systems and of MSO over transition trees (see also Chapter 16). It turns out that there is a general notion of automaton subsuming both characterizations, so we obtain a common ground to compare these two logics. Moreover we need the notion of the ω-unravelling for a transition system, on the one hand to obtain a bisimilar transition tree and on the other hand to increase the possibilities of choosing successors.

We study the language-theoretical aspects of parameterized communicating automata (PCAs), in which processes communicate via rendez-vous. A given PCA can be run on any topology of bounded degree such as pipelines, rings, ranked trees, and grids. We show that, under a context bound, which restricts the local behavior of each process, PCAs are effectively complementable. Complementability is considered a key aspect of robust automata models and can, in particular, be exploited for verification. In this paper, we use it to obtain a characterization of context-bounded PCAs in terms of monadic second-order (MSO) logic. As the emptiness problem for context-bounded PCAs is decidable for the classes of pipelines, rings, and trees, their model-checking problem wrt. MSO properties also becomes decidable. While previous work on model checking parameterized systems typically uses temporal logics without next operator, our MSO logic allows one to express several natural next modalities.

This tutorial will present an overview of the use of Monadic Second-Order Logic to describe sets of finite graphs and graph transformations, in relation with the notions of tree-width and clique-width. It will review applications to the construction of algorithms, to Graph Theory and to the extension to graphs of Formal Language Theory concepts.

An operation of concatenation is defined for graphs. This allows strings to be viewed as expressions denoting graphs, and string languages to be interpreted as graph languages. For a class \(K\) of string languages, \({\rm Int}(K)\) is the class of all graph languages that are interpretations of languages from \(K\). For the classes REG and LIN of regular and linear context-free languages, respectively, \({\rm Int}({\rm REG}) = {\rm Int}({\rm LIN})\). \({\rm Int}({\rm REG})\) is the smallest class of graph languages containing all singletons and closed under union, concatenation and star (of graph languages). \({\rm Int}({\rm REG})\) equals the class of graph languages generated by linear HR (= Hyperedge Replacement) grammars, and \({\rm Int}(K)\) is generated by the corresponding \(K\)-controlled grammars. Two characterizations are given of the largest class \(K'\) such that \({\rm Int}(K') = {\rm Int}(K)\). For the class CF of context-free languages, \({\rm Int}({\rm CF})\) lies properly inbetween \({\rm Int}({\rm REG})\) and the class of graph languages generated by HR grammars. The concatenation operation on graphs combines nicely with the sum operation on graphs. The class of context-free (or equational) graph languages, with respect to these two operations, is the class of graph languages generated by HR grammars.

In each graph-grammar approach it is defined how and under which conditions graph productions can be applied to a given graph in order to obtain a derived graph. The conditions under which productions can be applied are called application conditions. Although the generative power of most of the known general graph-grammar approaches is sufficient to generate any recursively enumerable set of graphs, it is often convenient to have specific application conditions for each production. Such application conditions, on the one hand, include context conditions like the existence or non-existence of nodes, edges, or certain subgraphs in the given graph as well as embedding restrictions concerning the morphisms from the left-hand side of the production to the given graph. In this paper, the concept of application conditions introduced by Ehrig and Habel is restricted to contextual conditions, especially negative ones. In addition to the general concept, we state local confluence and the Parallelism Theorem for derivations with application conditions. Finally we study context-free graph grammars with application conditions with respect to their generative power.

Given a sample from an unknown probability distribution over strings, there exist algorithms for inferring the structure and parameters of stochastic grammatical representations of the unknown distribution, i.e. string grammars. Despite the fact that research on grammatical representations of sets of graphs has been conducted since the late 1960’s, almost no work has considered the possibility of stochastic graph grammars and no algorithms exist for inferring stochastic graph grammars from data. This paper presents PEGG, an algorithm for estimating the parameters of stochastic context-free graph grammars given a sample from an unknown probability distribution over graphs. It is established formally that for a certain class of graph grammars PEGG finds parameter estimates in polynomial time that maximize the likelihood of the data, and preliminary empirical results demonstrate that the algorithm performs well in practice.KeywordsGraph TransformationGraph GrammarMaximum Likelihood ParameterStart SymbolEstimate Maximum Likelihood ParameterThese keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

Adaptive star grammars and their languages

We establish that every monadic second-order logic (MSO) formula on graphs with bounded treedepth is decidable in a constant number of rounds within the CONGEST model. To our knowledge, this marks the first meta-theorem regarding distributed model-checking. Various optimization problems on graphs are expressible in MSO. Examples include determining whether a graph G has a clique of size k, whether it admits a coloring with k colors, whether it contains a graph H as a subgraph or minor, or whether terminal vertices in G could be connected via vertex-disjoint paths. Our meta-theorem significantly enhances the work of Bousquet et al. [PODC 2022], which was focused on distributed certification of MSO on graphs with bounded treedepth. Moreover, our results can be extended to solving optimization and counting problems expressible in MSO, in graphs of bounded treedepth.

In this paper we discuss the use of views to address the problem of providing useful answers to provenance queries while ensuring that privacy concerns are met. In particular, we propose a hierarchical workflow model, based on context-free graph grammars, in which fine-grained dependencies between the inputs and outputs of a module are explicitly specified. Using this model, we examine how privacy concerns surrounding data, module function, and workflow structure can be addressed.

Recursive queries and context-free graph grammars

On the Complexity of Pattern Matching for Highly Compressed Two-Dimensional Texts

Tree-width and path-width are well-known graph parameters. Many NP-hard graph problems admit polynomial-time solutions when restricted to graphs of bounded tree-width or bounded path-width. In this work, we study the behavior of tree-width and path-width under various unary and binary graph transformations. For considered transformations, we provide upper and lower bounds for the tree-width and path-width of the resulting graph in terms of those of the initial graphs or argue why such bounds are impossible to specify. Among the studied unary transformations are vertex addition, vertex deletion, edge addition, edge deletion, subgraphs, vertex identification, edge contraction, edge subdivision, minors, powers of graphs, line graphs, edge complements, local complements, Seidel switching, and Seidel complementation. Among the studied binary transformations, we consider the disjoint union, join, union, substitution, graph product, 1-sum, and corona of two graphs.

Vertex-minors, monadic second-order logic, and a conjecture by Seese