The past, present, and a future for native charr in Japan

This study aimed to test the hypothesis that diets containing relatively high amounts of the Δ6 desaturated fatty acids stearidonic acid (STA, 18:4 n − 3) and γ-linolenic acid (GLA, 18:3 n − 6), may be beneficial in salmonid culture. The rationale being that STA and GLA would be better substrates for highly unsaturated fatty acid (HUFA) synthesis as their conversion does not require the activity of the reputed rate-limiting enzyme, fatty acid Δ6 desaturase. Duplicate groups of two Arctic charr ( Salvelinus alpinus L.) populations with different feeding habits, that had been reported previously to show differences in HUFA biosynthetic capacity, were fed for 16 weeks on two fish meal based diets containing 47% protein and 21% lipid differing only in the added lipid component, which was either fish oil (FO) or echium oil (EO). Dietary EO had no detrimental effect on growth performance and feed efficiency, mortalities, or liver and flesh lipid contents in either population. The proportions of 18:2 n − 6, 18:3 n − 3, 18:3 n − 6, 18:4 n − 3, 20:3 n − 6 and 20:4 n − 3 in total lipid in both liver and flesh were increased by dietary EO in both populations. However, the percentages of 20:5 n − 3 and 22:6 n − 3 were reduced by EO in both liver and flesh in both strains, whereas 20:4 n − 6 was only significantly reduced in flesh. In fish fed FO, HUFA synthesis from both [1- 14C]18:3 n − 3 and [1- 14C]20:5 n − 3 was significantly higher in the planktonivorous Coulin charr compared to the demersal, piscivorous Rannoch charr morph. However, HUFA synthesis was increased by EO in Rannoch charr, but not in Coulin charr. In conclusion, dietary EO had differential effects in the two populations of charr, with HUFA synthesis only stimulated by EO in the piscivorous Rannoch morph, which showed lower activities in fish fed FO. However, the hypothesis was not proved as, irrespective of the activity of the HUFA synthesis pathway in either population, feeding EO resulted in decreased tissue levels of n − 3HUFA and 20:4 n − 6. This has been observed previously in salmonids fed vegetable oils, and thus the increased levels of Δ6 desaturated fatty acids in EO did not effectively compensate for the lack of dietary HUFA.

The trophic ecology (diet and head morphology) and migration patterns of two closely related salmonid fishes, Arctic char (Salvelinus alpinus (L., 1758)) and Dolly Varden (Salvelinus malma (Walbaum, 1792)), were examined in tributaries of Lake Aleknagik, southwestern Alaska, to test for differentiation between species. Schoener’s index of proportional overlap and multivariate analyses of diets suggested that these species had significantly different trophic niches. Arctic char and the largest individuals of both species had the most diverse diets, and sockeye salmon (Oncorhynchus nerka (Walbaum, 1792)) eggs dominated the diet of both species, especially Arctic char. Arctic char had larger jaws and wider heads than Dolly Varden of similar body length, which may contribute to interspecific diet difference. The species also differed in migration patterns; otolith microchemistry indicated that juvenile Arctic char were produced by nonanadromous mothers, whereas the mothers of the Dolly Varden had been to sea in the season prior to spawning. The species also segregate in spawning habitat (Arctic char in the lakes and Dolly Varden in streams), as well as in juvenile rearing habitat. Our study provides the first evidence of divergent feeding and migratory ecology between sympatric juvenile Arctic char and Dolly Varden, differences that may constrain hybridization and introgression between them.

Little research has been conducted on effects of iteroparous anadromous fishes on Arctic lakes. We investigated trophic ecology, fish growth, and food web structure in six lakes located in Nunavut, Canada; three lakes contained anadromous Arctic charr (Salvelinus alpinus) whereas three lakes did not contain Arctic charr. All lakes contained forage fishes and lake trout (Salvelinus namaycush; top predator). Isotope ratios (δ13C, δ15N) of fishes and invertebrates did not differ between lakes with and without anadromous Arctic charr; if anadromous Arctic charr deliver marine-derived nutrients and/or organic matter to freshwater lakes, these inputs could not be detected with δ13C and/or δ15N. Lake trout carbon (C):nitrogen (N) and condition were significantly higher in lakes with Arctic charr (C:N = 3.42, K = 1.1) than in lakes without Arctic charr (C:N = 3.17, K = 0.99), however, and ninespine stickleback (Pungitius pungitius) condition was significantly lower in lakes with Arctic charr (K = 0.58) than in lakes without Arctic charr (K = 0.64). Isotope data indicated that pre-smolt and resident Arctic charr may be prey for lake trout and compete with ninespine stickleback. Linear distance metrics applied to isotope data showed that food webs were more compact and isotopically redundant in lakes where Arctic charr were present. Despite this, lake trout populations in lakes with Arctic charr occupied a larger isotope space and showed greater inter-individual isotope differences. Anadromous Arctic charr appear to affect ecology and feeding of sympatric freshwater species, but effects are more subtle than those seen for semelparous anadromous species.

Anadromous Arctic char (Salvelinus alpinus) and northern form Dolly Varden (Salvelinus malma malma) are highly valued by Indigenous communities in northern Canada. Rapid, ongoing environmental changes are affecting populations of both of these iteroparous species, and understanding variability in life-history tactics is essential for assessment of current and future impacts. The Coppermine River, Nunavut, provides a unique opportunity to study anadromous life-history types of Dolly Varden and Arctic char that occur in sympatry in fresh water and have documented inter- and intra-specific variability in overwintering locations. We used acoustic telemetry and physical samples from community collection programs to infer that Arctic char overwintered in easily accessible habitats in the lower reaches of the Coppermine River, likely in non-spawning years, and that spawning likely occurs in rivers other than the Coppermine. Younger and smaller Dolly Varden overwintered in the river below a substantial obstacle (a large cascade), along with some larger adults that we suggest skipped spawning. Larger Dolly Varden, including potential spawners, migrated above the cascade and overwintered in the upper reaches of the Coppermine River. Arctic char exhibited distinct patterns of return migration to fresh water that were consistent with intent to overwinter below the cascade. Dolly Varden that overwintered above the cascade exhibited distinct patterns of return migration that were consistent with directed movements. Patterns of return migration to fresh water for Dolly Varden that overwintered below the cascade suggested some individuals intended to overwinter below the cascade, whereas others may have attempted to overwinter in the upper reaches of the river but failed to ascend the cascade. The patterns and variability we observed in overwintering location and return migration to fresh water have important implications for community-based management of the local fishery, provide insights into the ecology and adaptability of Arctic char and Dolly Varden, and highlight a need for additional information regarding spawning locations and spawning frequency in this system.

Determining the timing and location of fish reproductive events is crucial for the implementation of correct management and conservation schemes. Conventional methods used to monitor these events are often unable to assess the spawning activity directly or can be invasive and therefore problematic. This is especially the case when threatened fish populations are the study subject, such as the Arctic charr ( Salvelinus alpinus L.) populations in Windermere (Cumbria, UK). Arctic charr populations have been studied in this lake since the 1940s, and the locations and characteristics of spawning grounds have been described in detail using techniques such as hydroacoustics, as well as physical and visual surveys of the lake bottom. Here, in conjunction with established netting surveys, we added an environmental DNA (eDNA) metabarcoding approach to assess the spatial distribution of Arctic charr in the lake throughout the year to test whether this tool could allow us to identify spawning locations and activity. Sampling was carried out between October 2017 and July 2018 at three locations in the lake, covering putative and known spawning sites. eDNA metabarcoding provided accurate spatial and temporal characterization of Arctic charr spawning events. Peaks of Arctic charr relative read counts from eDNA metabarcoding were observed during the spawning season and at specific locations of both putative and known spawning sites. Net catches of mature Arctic charr individuals confirmed the association between the Arctic charr spawning activity and the peaks of eDNA metabarcoding relative read counts. This study demonstrates the ability of eDNA metabarcoding to effectively and efficiently characterize the spatial and temporal nature of fish spawning in lentic systems.

Temperature changes affect salmonids across a hierarchy of spatial and temporal scales, so that shifts in thermal river regimes may influence interspecific interactions in sympatric species. In Northern Norway, anadromous populations of Arctic charr (Salvelinus alpinus) and Atlantic salmon (Salmo salar) coexist, but in recent years landings of Arctic charr have decreased, while those of Atlantic salmon have been stable or even increased. Here we studied relative abundance, habitat use and growth rate of sympatric stream-living juveniles of both species in Veidnes River, where they are the only fish species present. In 1998/2000, juvenile Arctic charr dominated, especially in the upper and colder part of the river. In 2010, however, Atlantic salmon juveniles were now prominent in all habitat types, whereas nearly all Arctic charr were captured in slow-flowing water near the river bank. Summer air temperature has increased in the region during the last decade. Positive correlations between summer temperatures and back-calculated growth rates were documented in both species, but the growth response was significantly higher in Atlantic salmon. Accordingly, we suggest that juvenile Atlantic salmon may benefit from a warmer climate in northernmost Norway, at the expense of the more cold-water-adapted Arctic charr.

Arctic charr (Salvelinus alpinus) is a salmonid species of high ecological and commercial value in the Holarctic region. Nevertheless, more information is needed about its underlying genetic diversity and population structure in the Nordics, especially regarding farmed populations. High-throughput sequencing was applied in three Arctic charr populations of anadromous or landlocked origin from Finland, Norway and Sweden. More specifically, the animals from the Swedish and Norwegian populations originated from a major egg supplier and producer, respectively. Furthermore, in the case of the Finnish population, the sampled animals originated from the only active conservation program for Arctic charr in the country with a potential interest in farming. Using double-digest restriction site-associated DNA sequencing (ddRAD-seq) on more than 500 fish, over 2000 single nucleotide polymorphisms (SNPs), both in the form of individual SNPs and as read haplotypes, were used to study the genetic diversity and structure of those populations. Genetic diversity metrics were similar between the Norwegian and the Swedish populations. However, substantially lower (40–50 %) genetic diversity was found in the Finnish population. Moreover, considerable genetic differentiation was implied between the studied populations as the mean fixation index (FST) was above 0.1 in all pairwise comparisons. All populations were easily discernible through either principal component analysis (PCA) or discriminant analysis of principal components (DAPC). In addition, unsupervised machine learning models such as K-means, Gaussian and Bayesian Gaussian mixtures were assessed for their ability to detect genetic clusters. A preceding dimensionality reduction step by PCA resulted in all three models, suggesting that the most probable number of clusters was three. Overall, our study affirmed the utility of the developed ddRAD-seq genotyping method and unveiled the genetic structure of the studied populations, both of which could contribute to their more efficient management by captive breeding.

The north and south basins of Windermere in the English Lake District, UK, support autumn- and spring-spawning populations of Arctic charr, Salvelinus alpinus, which have been studied since the 1930s. Continuous investigations of the population dynamics of Arctic charr at this lake have involved gill netting since 1939, collection of fishery catch-per-unit-effort data since 1966, and hydroacoustic surveys since 1990. Analysis of these and associated long-term data on the abiotic environment and other components of the fish communities revealed recently contrasting fortunes of the Arctic charr populations of the north and south basins, the latter of which has been significantly impacted by eutrophication while both basins have shown elevated water temperatures and increasing roach, Rutilus rutilus, populations. Despite the introduction of phosphate stripping in 1992 and some subsequent initial improvement, the hypolimnion of the south basin still remains significantly eutrophicated and the fishery catch-per-unit-effort in this basin is now at record low levels. In addition, the spatial distribution of roach has expanded to form significant components of the fish communities of inshore and offshore surface habitats, where this cyprinid may compete with Arctic charr for zooplanktonic prey. It is concluded that the Arctic charr populations of Windermere, particularly those of the south basin, currently face a number of significant environmental pressures and continued management action is required to ensure their survival.

The effects of three different temperatures on the growth and maturation of the offspring of cultured versus wild populations of juvenile arctic charr (Salvelinus alpinus L.) were investigated. The fish (start weight 17 g) were reared for 5 months at constant temperatures of 12, 14 and 16°C under a continuous light regime (LD24:0). Growth performance was significantly influenced by both temperature and source population. The offspring from the farmed fish displayed significantly higher mean weights at all temperatures compared with the offspring from the wild fish. The results indicate that the optimal temperature for growth (Topt) decreases with increasing fish size in the offspring of both cultivated and wild fish. Significant differences in length–weight relationship were found, with the offspring of wild fish displaying higher condition factor throughout the experiment. The results demonstrate that the offspring from multiple generation farmed population of arctic charr are better adapted to high temperatures compared with the offspring (F1 generation) from a wild population of arctic charr, and the former are also able to maintain growth at higher temperatures. There was a significant difference in maturation between the two populations, as the offspring from cultured fish displayed significantly lower level of maturation: 0%, 4% and 2% mature compared with 24%, 40% and 42% in the offspring from wild fish at temperatures of 12, 14 and 16°C respectively. The offspring from farmed strains of arctic charr thus appear to be the most suitable population for aquaculture.

Lake Pisses and Lake Labarre are two oligotrophic high altitude alpine lakes that have sympatric populations of Arctic charr and brown trout. These two lakes have similar morphometric, physical and chemical characteristics. The zooplanktonic and benthic fauna show little diversity. But the density of benthos (Chironomidae) and zooplankton is higher in Lake Pisses. The fish fauna of Lake Pisses is slightly more abundant than that of Lake Labarre, althought in both lakes fish density is low. A study of the diet of the two species revealed differences. In Lake Pisses, where the food supply is better, Arctic charr takes exclusively pelagic and benthic prey, whereas in Lake Labarre it also takes exogenous prey and thus comes into competition with trout. Length and body weight growth rates for Arctic charr are higher in Lake Pisses than in Lake Labarre. For trout, maximum length recorded was in Lake Pisses. The results show that the abundance of Chironomidae favours coexistence of the two species in Lake Pisses and confirm that, in the face of shortage of food, Arctic charr is better adapted than trout.

Blood sera from four populations of charr (Salvelinus alpinus L.) inhabiting three lakes in Cumbria were analysed for genetic polymorphisms. Evidence was obtained at the esterase locus supporting the genetic isolation of two temporally distinct spawning populations of charr in Windermere. Significant differences at the transferrin and esterase loci between the Coniston population of charr and the populations found in Ennerdale Water and Windermere were thought to be due to genetic drift following severe reduction in the effective population size in Coniston water.

,This research paired Inuit and scientific knowledge of sympatric populations of anadromous Arctic char, Iqalukpik (Salvelinus alpinus) in the Amundsen Gulf in the western Canadian Arctic to examine fish appearance, origin, movement, and health. Sixteen Elders and fishers from Ulukhaktok, Northwest Territories were engaged through semi-structured interviews and workshops, during which they shared some of their knowledge of local anadromous Arctic char populations and co-interpreted the results of morphometric, telemetry, and health analyses on those same populations. Analysis of these discussions revealed points of alignment and divergence between Inuit and scientific knowledge, and gaps in our collective understanding of the species. Inuit participants confidently identified a fish’s lake-of-origin based on appearance alone, indicating differences in Arctic char morphology among lakes, contradicting the findings of scientific morphometric analysis. Participants confirmed two primary marine migration pathways for Arctic char also documented by telemetry, and a third pathway not captured by telemetry. Finally, a comparison of body condition factors (weight-length ratio) and participants’ assessments of fish health showed strong agreement, though participants employed a wider range of indicators, including stamina, skin and flesh colour, girth, and gill condition. By pairing Inuit and scientific knowledge, this research offers an enriched understanding of Arctic char, which is crucial for the effective monitoring and co-management of this species of significance to Inuit

Glaciers in the Svalbard Archipelago are retreating rapidly in response to climate change. This retreat leads to the alteration of the hydrological and thermal regimes of freshwater ecosystems. In this delicate context, existing anadromous Arctic charr (Salvelinus alpinus) populations are at severe risk and might disappear from the archipelago. However, the retreat of glaciers also promotes the formation of new lake systems that might be suitable for colonization by anadromous Arctic charr. These systems may provide a substantial opportunity for the establishment of new populations of anadromous charr, potentially buffering the decline in existing systems. To date, there is a lack of information on the number of recently deglaciated lake systems that have emerged since the end of the Little Ice Age (ca. 1920) that might be suitable for charr colonization. Therefore, the goal of this paper is to provide an initial assessment of the number of these lakes. To this end, and in accordance with previously published research, this study assesses whether a recently deglaciated lake system is potentially open to colonization based on gradient, river length, and lake surface area. Depending on the applied threshold (four in total), up to 24 lake systems are classified as potentially open to colonization by anadromous Arctic charr, with Spitsbergen emerging as a potential hotspot for colonization. The findings of this paper might serve as basis for new studies and for implementing proactive management and conservation strategies to protect anadromous charr populations.

Landlocked Arctic charr (Salvelinus alpinus) populations in sub-Arctic and Arctic Greenland lakes were sampled with multi-mesh-sized survey gillnets. The study covered a range of small shallow lakes (0.01 km 2 , maximum depth 200 m). Arctic charr were found in one to three diAerent forms in lakes with maximum depths >3 m. A dwarf form occurred in all lakes in- habited by Arctic charr and was the only form in lakes with maximum depths 20 m and a surface area 20 m, large-sized charr were more abundant, and the length-frequency distribution of the population was bi- modal, with a first mode around 10-12 cm and a second mode around 26-37 cm. In a single large and deep lake, a distinct medium-sized pelagic zooplankton-eating charr form occurred. Maximum size of individual charr was significantly positively correlated with lake maximum depth and volume, and the mean size of large-sized charr was significantly positively correlated with lake volume. Our study indicates that the charr population structure became more complex with increasing lake size. More- over, the population structure seemed to be influenced by lake-water transparency and the presence or absence of three-spined stickleback (Gasterosteus aculeatus).

The fish fauna of Lake Frolikha comprises 12 species confirmed by our recent studies: roach Rutilus rutilus (L.), minnow Phoxinus phonixus (L.), stone loach Barbatula toni (Dyb.), spine loach Cobitis melanoleuca Nichols, pike Esox lucius L. lenok Brachymystax lenok (Pallas), Arctic charr Salvelinus alpinus (L.), Baikal black grayling Thymallus baicalensis (Dyb.), burbot Lota lota (L.), sand sculpin Leocottus kesslerii (Dyb.), stone sculpin Paracottus knerii (Dyb.) and perch Perca fluviatilis L. Biological peculiarities of these fishes are determined by unique geographical position and limnic characteristics of Lake Frolikha. Being a typical glacial lake it is located at rather low altitude a.s.l. and is adjacent to the unparalleled ecosystem of Lake Baikal. An underdeveloped shallow coastal zone with sparse aquatic vegetation, which is characteristic of glacial lakes, determines some biological traits of Lake Frolikha cyprinids. As compared with other mountain lakes of Baikal Rift Zone (BRZ), roach and minnow have lower rates of linear and weight growth as well as unusual population sex ratios. Male to female ratio in roach is 2:1 and in minnow it is 1:1 whereas in other lakes it reaches 1:4 and 1:10 respectively. The presence of native Baikal species in Lake Frolikha provided abundant food for piscivores: sand sculpins are the dominant food item of lenok, Arctic charr and perch. Lenok and perch demonstrate prominent linear and weight growth rate in the lake. In other lakes of BRZ with less abundant prey fish species Arctic charr typically diverge into several trophic forms, but in Lake Frolikha they established a monomorphic mostly piscivorous population. Charr from Lake Frolikha are relatively small and short-lived representatives of the large form of Transbaikalian charr. Their unique feature is river spawning, which is not observed in any other charr population within BRZ. Due to special protection regime of the territory, which minimizes catch losses, several fish species maintain natural unaffected structure of their populations evidenced by the abundance of old fish. The population of lenok is represented by 19 age groups, the population of roach – by 15 groups and that of burbot – by 12 groups. Alternatively, populations of small-sized prey species such as minnow and sand sculpin, which are heavily influenced by numerous predators include fewer age groups than in other mountain lakes of BRZ.