• Home
  • Search
  • UNIQUIMER 3D, a software system for structural DNA nanotechnology design, analysis and evaluation
  • Cite Icon44
  • https://doi.org/10.1093/nar/gkp005Copy DOI Icon

UNIQUIMER 3D, a software system for structural DNA nanotechnology design, analysis and evaluation

Show More
  • Abstract
  • Literature Map
  • References
  • Citations
  • Similar Papers
Abstract

A user-friendly software system, UNIQUIMER 3D, was developed to design DNA structures for nanotechnology applications. It consists of 3D visualization, internal energy minimization, sequence generation and construction of motif array simulations (2D tiles and 3D lattices) functionalities. The system can be used to check structural deformation and design errors under scaled-up conditions. UNIQUIMER 3D has been tested on the design of both existing motifs (holiday junction, 4 × 4 tile, double crossover, DNA tetrahedron, DNA cube, etc.) and nonexisting motifs (soccer ball). The results demonstrated UNIQUIMER 3D's capability in designing large complex structures. We also designed a de novo sequence generation algorithm. UNIQUIMER 3D was developed for the Windows environment and is provided free of charge to the nonprofit research institutions.

Similar Papers
  • Research Article

Optical Fiber Dispersion Compensation Based on Optic System

  • Sep 01, 2014
  • Applied Mechanics and Materials
  • Wei Song +4
  • Research Article
  • Citations1

Reciprocal constructions using Ponclelet duality and conic section

  • Jul 24, 2016
  • Apollo (University of Cambridge)
  • Marina Konstantatou +1
  • Research Article
  • Citations17

Stochastic model updating using distance discrimination analysis

  • Aug 20, 2014
  • Chinese Journal of Aeronautics
  • Zhongmin Deng +2
  • Research Article
  • Citations31

A C# code for solving 3D topology optimization problems using SAP2000

  • May 09, 2018
  • Optimization and Engineering
  • Nikos D Lagaros +2
  • Book Chapter

On the Co-Evolution of SSADM and the UML

  • Jan 01, 2005
  • Richard J Botting
  • Book Chapter
  • Citations5

The Clinical Information System

  • Jan 01, 2006
  • Gurpreet Dhillon
  • Research Article
  • Citations19

Results of survey of use of SSADM in commercial and government sectors in United Kingdom

  • Jan 01, 1989
  • Information and Software Technology
  • Hm Edwards +2
  • Research Article
  • Citations1

Modelling of web-based virtual university administration for Nigerian universities

  • Jul 03, 2014
  • AFRREV STECH: An International Journal of Science and Technology
  • Bce Mbam +1
  • PDF
  • Research Article
  • Citations1

A Model for Predicting Migration from IPV4 to IPV6 by 2027 in Nigeria

  • Jan 01, 2018
  • Open Journal of Modelling and Simulation
  • Emmanuel Ekwonwune Nwabueze +2
  • Book Chapter

Using SSADM for Relational Design

  • Jan 01, 2016
  • Bhushan Lakhe
  • Conference Article
  • Citations1

A STEP-Based Integrated Structural Design System for Steel Framed Buildings

  • Aug 04, 2000
  • S K Park +2
  • Research Article

A robust strategy for FE model updating of composite panels using a combined ANN-SMA surrogate-assisted optimization framework

  • Feb 24, 2026
  • Scientific Reports
  • Mohsen Kouhi +2
  • Research Article
  • Citations17

Wind resistant size optimization of geometrically nonlinear lattice structures using a modified optimality criterion method

  • Jul 12, 2018
  • Engineering Structures
  • Ji-Yang Fu +5
  • Conference Article
  • Citations4

Free Vibrations of Composite Shallow Circular Cylindrical Shell Panels Stiffened by A Bonded Non-Central Shell Strip

  • Apr 22, 2002
  • Varly´K Özerciyes +1
  • Book Chapter
  • Citations14

Dynamical Integrity: A Novel Paradigm for Evaluating Load Carrying Capacity

  • Sep 25, 2018
  • Giuseppe Rega +2
Cactus Communications logo

Copyright 2026 Cactus Communications. All rights reserved.