Fast Sorting on a Linear Array with a Reconfigurable Pipelined Bus System

We present two fast algorithms for sorting on a linear array with a reconfigurable pipelined bus system (LARPBS), one of the recently proposed parallel architectures based on optical buses. In our first algorithm, we sort N numbers in O(log N log log N) worst-case time using N processors. In our second algorithm, we sort N numbers in O((log log N)/sup 2/) worst-case time using N/sup 1+/spl epsi// processors, for any fixed /spl epsi/ such that 0 < /spl epsi/ < 1. Our algorithms are based on a novel deterministic sampling scheme for merging two sorted arrays of length N each in O(log log N) time on an LARPBS with N processors. To our knowledge, the previous best sorting algorithm on this architecture has a running time of O((log N)/sup 2/) using N processors.

Almost all of the existing two-dimensional block-based medial axis transform (2D_BB_MAT) parallel algorithm are devised for solving the 2D_BB_MAT problem only and are very difficult to extend to a solution of the 3D_BB_MAT problem in parallel. In this paper, we propose efficient O(1) time algorithms for solving the hD_BB_MAT problems, where h is 2 or 3, on the linear array with a reconfigurable pipelined bus system (LARPBS) model. The proposed 2D_BB_MAT algorithm can easily extend to a solution of the 3D_BB_MAT problem in parallel by reducing the hD_BB_MAT problems to the forward chessboard distance transform problems. To the best of our knowledge, the proposed algorithms are the most efficient O(1) time algorithms compared with all the previously published algorithms known.

In this paper, we present an efficient deterministic algorithm for sorting on the LARPBS (Linear Array with a Reconfigurable Pipelined Optical Bus System) model. Our sorting algorithm sorts n general keys in O(logn) time on a LARPBS of size nslogn. The previous best results can sort n items in O(lognloglogn) worst-case time using n processors or sort n items in O((log logn2)worst-case time using n1+ processors. Our algorithm is also scalable to certain extent. When the system size is reduced to nslogn/r for l≤r≤logn, the total computation time is O(rlogn).

In the channel routing problem, terminals between cells are interconnected completely while reducing channel routing area. The crossing number, the number of crossings between two wires in the channel, is related to the channel routing area. In this paper, we present a parallel algorithm finding a maximum crossing number, density, in the channel by using a LARPBS model (Linear Array with a Reconfigurable Pipelined Bus System), which is based on the advanced fiber optic technology. The maximum crossing number algorithm on the LARPBS model runs in O(n) time using O(n) number of processors, where n is the number of nets in a channel.

Efficient and scalable quicksort on a linear array with a reconfigurable pipelined bus system

The optical bus based arrays have recently shown many applications. In this paper we use the pipelining ability of the LARPBS to solve the repetitions detection problem. We propose an algorithm that finds all kind of repetitions in a string including k-power repetitions, overlapping repetitions and non-contiguous repetitions. For a given distance, this operation is performed in O(1) communication cycle with a constant computation time processors on a O(n) processors LARPBS for a string of length n. For all the periods, it is O(n) bus cycle. No previous algorithms were known for this problem on the LARPBS.

We present efficient parallel matrix multiplication algorithms for linear arrays with reconfigurable pipelined bus systems (LARPBS). Such systems are able to support a large volume of parallel communication of various patterns in constant time. An LARPBS can also be reconfigured into many independent subsystems and, thus, is able to support parallel implementations of divide-and-conquer computations like Strassen's algorithm. The main contributions of the paper are as follows. We develop five matrix multiplication algorithms with varying degrees of parallelism on the LARPBS computing model; namely, MM/sub 1/, MM/sub 2/, MM/sub 3/, and compound algorithms C/sub 1/(/spl epsiv/)and C/sub 2/(/spl delta/). Algorithm C/sub 1/(/spl epsiv/) has adjustable time complexity in sublinear level. Algorithm C/sub 2/(/spl delta/) implies that it is feasible to achieve sublogarithmic time using /spl sigma/(N/sup 3/) processors for matrix multiplication on a realistic system. Algorithms MM/sub 3/, C/sub 1/(/spl epsiv/), and C/sub 2/(/spl delta/) all have o(/spl Nscr//sup 3/) cost and, hence, are very processor efficient. Algorithms MM/sub 1/, MM/sub 3/, and C/sub 1/(/spl epsiv/) are general-purpose matrix multiplication algorithms, where the array elements are in any ring. Algorithms MM/sub 2/ and C/sub 2/(/spl delta/) are applicable to array elements that are integers of bounded magnitude, or floating-point values of bounded precision and magnitude, or Boolean values. Extension of algorithms MM/sub 2/ and C/sub 2/(/spl delta/) to unbounded integers and reals are also discussed.

In this paper, we present deterministic and probabilistic methods for simulating PRAM computations on linear arrays with reconfigurable pipelined bus systems (LARPBS). The following results are established in this paper. (1) Each step of a p-processor PRAM with meO(p) shared memory cells can be simulated by a p-processors LARPBS in O(log p) time, where the constant in the big-O notation is small. (2) Each step of a p-processor PRAM with meΩ(p) shared memory cells can be simulated by a p-processors LARPBS in O(log m) time. (3) Each step of a p-processor PRAM can be simulated by a p-processor LARPBS in O(log p) time with probability larger than 1−1/p^c for all c>0. (4) As an interesting byproduct, we show that a p-processor LARPBS can sort p items in O(log p) time, with a small constant hidden in the big-O notation. Our results indicate that an LARPBS can simulate a PRAM very efficiently.

We give a number of new lower bounds in the cell probe model&lt;br /&gt;with logarithmic cell size, which entails the same bounds on the random access computer with logarithmic word size and unit cost operations. We study the signed prefix sum problem: given a string of length n of zeroes and signed ones, compute the sum of its ith prefix during updates. We show a&lt;br /&gt;lower bound of Omega(log n/log log n) time per operations, even if the prefix sums are bounded by log n/log log n during all updates. We also show that if the update time is bounded by the product of the worst-case update time and the&lt;br /&gt;answer to the query, then the update time must be Omega(sqrt(log n/ log log n)).&lt;br /&gt; These results allow us to prove lower bounds for a variety of seemingly unrelated&lt;br /&gt;dynamic problems. We give a lower bound for the dynamic planar point location in monotone subdivisions of &lt;br /&gt;Omega(log n/ log log n) per operation. We give&lt;br /&gt;a lower bound for the dynamic transitive closure problem on upward planar graphs with one source and one sink of &lt;br /&gt;Omega(log n/(log logn)^2) per operation. We give a lower bound of Omega(sqrt(log n/log log n)) for the dynamic membership problem of any Dyck language with two or more letters. This implies the same&lt;br /&gt;lower bound for the dynamic word problem for the free group with k generators. We also give lower bounds for the dynamic prefix majority and prefix equality problems.

Order statistics on optically interconnected multiprocessor systems

Many dynamic graph algorithms have an amortized update time, rather than a stronger worst-case guarantee. But amortized data structures are not suitable for real-time systems, where each individual operation has to be executed quickly. For this reason, there exist many recent randomized results that aim to provide a guarantee stronger than amortized expected. The strongest possible guarantee for a randomized algorithm is that it is always correct (Las Vegas) and has high-probability worst-case update time, which gives a bound on the time for each individual operation that holds with high probability. In this article, we present the first polylogarithmic high-probability worst-case time bounds for the dynamic spanner and the dynamic maximal matching problem. (1) For dynamic spanner, the only known o ( n ) worst-case bounds were O ( n 3/4 ) high-probability worst-case update time for maintaining a 3-spanner and O ( n 5/9 ) for maintaining a 5-spanner. We give a O (1) k log 3 ( n ) high-probability worst-case time bound for maintaining a ( 2k-1 )-spanner, which yields the first worst-case polylog update time for all constant k . (All the results above maintain the optimal tradeoff of stretch 2k-1 and Õ( n 1+1/k ) edges.) (2) For dynamic maximal matching, or dynamic 2-approximate maximum matching, no algorithm with o(n) worst-case time bound was known and we present an algorithm with O (log 5 ( n )) high-probability worst-case time; similar worst-case bounds existed only for maintaining a matching that was (2+ϵ)-approximate, and hence not maximal. Our results are achieved using a new approach for converting amortized guarantees to worst-case ones for randomized data structures by going through a third type of guarantee, which is a middle ground between the two above: An algorithm is said to have worst-case expected update time ɑ if for every update σ, the expected time to process σ is at most ɑ. Although stronger than amortized expected, the worst-case expected guarantee does not resolve the fundamental problem of amortization: A worst-case expected update time of O(1) still allows for the possibility that every 1/ f(n) updates requires ϴ ( f(n) ) time to process, for arbitrarily high f(n) . In this article, we present a black-box reduction that converts any data structure with worst-case expected update time into one with a high-probability worst-case update time: The query time remains the same, while the update time increases by a factor of O (log 2(n) ). Thus, we achieve our results in two steps: (1) First, we show how to convert existing dynamic graph algorithms with amortized expected polylogarithmic running times into algorithms with worst-case expected polylogarithmic running times. (2) Then, we use our black-box reduction to achieve the polylogarithmic high-probability worst-case time bound. All our algorithms are Las-Vegas-type algorithms.

Analysis of genomes evolving by inversions leads to a combinatorial problem of sorting by reversals studied in detail recently. Following a series of work recently, Hannenhalli and Pevzner developed the first polynomial algorithm for the problem of sorting signed permutations by reversals and proposed an O(n 4) implementation of the algorithm. In this paper we exploit a few combinatorial properties of the cycle graph of a permutation and propose an O(n 2 α(n)) implementation of the algorithm where α is the inverse Ackerman function. Besides making this algorithm practical, our technique improves implementations of the other rearrangement distance problems.KeywordsGenome RearrangementPolynomial AlgorithmUnoriented ComponentIdentity PermutationOriented CycleThese keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

With the rapid growth in the number of applications served by the microprocessor in the electronic device, brings the significant challenges such as response time, bit error probability, computational complexity etc. In order to replace the existing electrical technology due to its delay prone and huge energy loss, optical technology can be adopted because of reliability, high data speed, and low interference. This paper introduces the new concept to improve the overall capacity of the optical system. Multiple input multiple output (MIMO) is adopted to improve the diversity and reduce error in transmission. The analysis is based on the transceivers location and channel gain in the optical bus. Scattering effect for different wavelength rays is also analyzed in unguided optical bus environment.

Sorting and merging are two problems that commonly arise in Computer Science especially in data processing tasks. To solve these problems, several algorithms have been developed. Similarly, existing merge and sorting algorithms have been improved to provide more efficient and accurate results. In this paper, selection and merging algorithms were developed on an octa-core processing machine using System.nanoTime methods in Java in order to compare their running times. The results obtained show that Merge Sort performs far better than selection sort with careful implementations by taking advantage of multiple processing cores in the test machine and some concurrency utility in Java. It was concluded that implementing algorithms using a machine with multiple numbers of cores in their Central Processing Unit (CPU) will result in a significant improvement in the performance of both algorithms.

The weak-heap data structure: Variants and applications